Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CAMTA2 ENSBTAG00000008591

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Description

calmodulin binding transcription activator 2 [Source:VGNC Symbol;Acc:VGNC:26733]

Location

Primary_assembly 19: 26,418,826-26,434,460 forward strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 6 transcripts (splice variants), 191 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000121551.2	CAMTA2-201	4576	1258aa	ENSBTAP00000076947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S002	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000142164.1	CAMTA2-205	4800	1224aa	ENSBTAP00000105203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000080761.3	CAMTA2-206	4713	1195aa	ENSBTAP00000063647.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LT81	-
ENSBTAT00000083943.3	CAMTA2-203	4528	1210aa	ENSBTAP00000074377.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MRH0	-
ENSBTAT00000090871.2	CAMTA2-202	4237	1106aa	ENSBTAP00000091854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZG9	-
ENSBTAT00000011330.8	CAMTA2-204	4176	1191aa	ENSBTAP00000011330.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BH04	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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