Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LSM4 ENSBTAG00000008578

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Description

LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:VGNC Symbol;Acc:VGNC:31056]

Location

Primary_assembly 7: 4,880,889-4,893,672 forward strand.

ARS-UCD2.0:CM008174.2

About this gene

This gene has 3 transcripts (splice variants), 192 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000110193.2	LSM4-201	1151	139aa	ENSBTAP00000100020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3ZBK6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000011312.7	LSM4-202	915	125aa	ENSBTAP00000011312.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DI98	-
ENSBTAT00000085767.2	LSM4-203	396	131aa	ENSBTAP00000065542.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF7A9M7	-

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Summary

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