Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SCRIB ENSBTAG00000008421

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Description

scribble planar cell polarity protein [Source:VGNC Symbol;Acc:VGNC:34365]

Location

Primary_assembly 14: 986,840-1,006,710 forward strand.

ARS-UCD2.0:CM008181.2

About this gene

This gene has 5 transcripts (splice variants), 185 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000079017.3	SCRIB-201	5244	1603aa	ENSBTAP00000061172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LUY1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000136939.1	SCRIB-202	5181	1582aa	ENSBTAP00000106538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000011082.8	SCRIB-203	5169	1578aa	ENSBTAP00000011082.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N0Y1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000080523.3	SCRIB-204	5061	1542aa	ENSBTAP00000067630.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MAJ4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000108853.2	SCRIB-205	5058	1541aa	ENSBTAP00000076221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RY88	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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