Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC23A1 ENSBTAG00000010798

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Description

solute carrier family 23 member 1 [Source:VGNC Symbol;Acc:VGNC:34733]

Location

Primary_assembly 7: 50,647,652-50,661,422 reverse strand.

ARS-UCD2.0:CM008174.2

About this gene

This gene has 5 transcripts (splice variants), 199 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000114937.1	SLC23A1-202	2138	639aa	ENSBTAP00000101115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TVF2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000127383.1	SLC23A1-204	2021	600aa	ENSBTAP00000101670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TW55	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000105466.1	SLC23A1-201	1907	562aa	ENSBTAP00000097967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TI55	-
ENSBTAT00000097528.1	SLC23A1-205	1895	558aa	ENSBTAP00000084603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SEP5	-
ENSBTAT00000010823.7	SLC23A1-203	1871	614aa	ENSBTAP00000010823.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BI45	-

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Summary

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