Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PRKCSH ENSBTAG00000008202

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Description

PRKCSH beta subunit of glucosidase II [Source:VGNC Symbol;Acc:VGNC:33335]

Location

Primary_assembly 7: 15,811,391-15,825,187 forward strand.

ARS-UCD2.0:CM008174.2

About this gene

This gene has 4 transcripts (splice variants), 185 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000132185.2	PRKCSH-202	2479	623aa	ENSBTAP00000075443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RSD3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000010787.6	PRKCSH-203	2443	611aa	ENSBTAP00000010787.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YSJ2	-
ENSBTAT00000071585.3	PRKCSH-204	2389	593aa	ENSBTAP00000072069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MKJ7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000072637.2	PRKCSH-201	2363	615aa	ENSBTAP00000073524.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MTB8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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