Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SOX13 ENSBTAG00000008132

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Description

SRY-box transcription factor 13 [Source:VGNC Symbol;Acc:VGNC:35142]

Location

Primary_assembly 16: 1,867,583-1,912,515 forward strand.

ARS-UCD2.0:CM008183.2

About this gene

This gene has 7 transcripts (splice variants), 211 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000147976.1	SOX13-207	3842	681aa	ENSBTAP00000106824.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000135274.2	SOX13-205	3788	658aa	ENSBTAP00000077147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S1G8	-
ENSBTAT00000101325.2	SOX13-202	3729	648aa	ENSBTAP00000098725.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TQM6	-
ENSBTAT00000101806.2	SOX13-206	3621	627aa	ENSBTAP00000088552.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SYV5	-
ENSBTAT00000087945.2	SOX13-204	3581	625aa	ENSBTAP00000097811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TLJ4	-
ENSBTAT00000122837.2	SOX13-201	3551	615aa	ENSBTAP00000079596.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S149	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000010692.8	SOX13-203	3499	626aa	ENSBTAP00000010692.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BL97	-

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Summary

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