Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS37C ENSBTAG00000008064

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Description

VPS37C subunit of ESCRT-I [Source:VGNC Symbol;Acc:VGNC:36821]

Location

Primary_assembly 29: 37,451,425-37,481,097 reverse strand.

ARS-UCD2.0:CM008196.2

About this gene

This gene has 4 transcripts (splice variants), 192 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000133989.1	VPS37C-202	2313	370aa	ENSBTAP00000088046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SNZ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000010607.6	VPS37C-203	2113	350aa	ENSBTAP00000010607.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BC70	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000092633.1	VPS37C-201	2077	338aa	ENSBTAP00000097657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9THD4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000100733.1	VPS37C-204	1319	361aa	ENSBTAP00000081167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S5E6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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