Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SREBF1 ENSBTAG00000007884

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Description

sterol regulatory element binding transcription factor 1 [Source:VGNC Symbol;Acc:VGNC:35274]

Location

Primary_assembly 19: 34,633,039-34,649,781 forward strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 3 transcripts (splice variants), 198 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000072037.3	SREBF1-203	4682	1146aa	ENSBTAP00000057628.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MST2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000010372.7	SREBF1-201	4776	1122aa	ENSBTAP00000010372.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RVY7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000072870.3	SREBF1-202	4680	1090aa	ENSBTAP00000062207.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M285	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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