Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: STAT1 ENSBTAG00000007867

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Description

signal transducer and activator of transcription 1 [Source:VGNC Symbol;Acc:VGNC:56151]

Location

Primary_assembly 2: 79,517,719-79,556,735 reverse strand.

ARS-UCD2.0:CM008169.2

About this gene

This gene has 4 transcripts (splice variants), 275 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000084342.2	STAT1-203	3517	817aa	ENSBTAP00000067158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1ME65	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000061553.4	STAT1-201	3543	749aa	ENSBTAP00000053390.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BPP7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000091618.1	STAT1-202	3483	729aa	ENSBTAP00000083699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SIU1	-
ENSBTAT00000010351.7	STAT1-204	2866	762aa	ENSBTAP00000010351.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3S5ZPJ6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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