Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SHOC2 ENSBTAG00000007709

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Description

SHOC2 leucine rich repeat scaffold protein [Source:VGNC Symbol;Acc:VGNC:34605]

Location

Primary_assembly 26: 31,480,296-31,568,996 forward strand.

ARS-UCD2.0:CM008193.2

About this gene

This gene has 4 transcripts (splice variants), 205 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000010138.7	SHOC2-203	4804	582aa	ENSBTAP00000010138.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QLV3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000095440.2	SHOC2-204	4406	536aa	ENSBTAP00000082542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SFX8	-
ENSBTAT00000137053.1	SHOC2-201	2010	520aa	ENSBTAP00000104517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000108174.2	SHOC2-202	1887	479aa	ENSBTAP00000075933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RUR6	-

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Summary

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