Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
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Phenotypes
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ID History
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Gene: TRAPPC8 ENSBTAG00000007696

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Description

trafficking protein particle complex subunit 8 [Source:VGNC Symbol;Acc:VGNC:97321]

Location

Primary_assembly 24: 25,259,637-25,350,266 forward strand.

ARS-UCD2.0:CM008191.2

About this gene

This gene has 3 transcripts (splice variants) and 214 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000086931.3	TRAPPC8-202	5469	1435aa	ENSBTAP00000065517.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N5L8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000010121.8	TRAPPC8-203	5376	1404aa	ENSBTAP00000010121.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MLG3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000151949.1	TRAPPC8-201	2315	664aa	ENSBTAP00000105136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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