Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: BBS4 ENSBTAG00000007614

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Description

Bardet-Biedl syndrome 4 [Source:NCBI gene (formerly Entrezgene);Acc:532120]

Location

Primary_assembly 10: 19,486,053-19,532,119 forward strand.

ARS-UCD2.0:CM008177.2

About this gene

This gene has 5 transcripts (splice variants), 210 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000101286.2	BBS4-201	2767	573aa	ENSBTAP00000089643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SWE1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000095233.2	BBS4-205	2608	565aa	ENSBTAP00000099716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TMX9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000069146.3	BBS4-202	2392	507aa	ENSBTAP00000070054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MLA1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000010013.6	BBS4-203	2352	538aa	ENSBTAP00000010013.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YRD5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000141926.1	BBS4-204	2118	475aa	ENSBTAP00000107727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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