Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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Molecular interactions
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ID History
- Gene history

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Gene: C20H5orf34 ENSBTAG00000007461

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Description

chromosome 20 C5orf34 homolog [Source:VGNC Symbol;Acc:VGNC:52671]

Location

Primary_assembly 20: 31,300,276-31,335,480 forward strand.

ARS-UCD2.0:CM008187.2

About this gene

This gene has 4 transcripts (splice variants) and 174 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000009815.6	C20H5orf34-202	3178	638aa	ENSBTAP00000009815.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4FUB0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000082919.3	C20H5orf34-203	3088	637aa	ENSBTAP00000058741.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MV26	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000070891.3	C20H5orf34-201	2865	577aa	ENSBTAP00000064024.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M213	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000098802.1	C20H5orf34-204	2243	608aa	ENSBTAP00000081179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S7G9	-

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Summary

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