Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HS3ST1 ENSBTAG00000007449

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Description

heparan sulfate-glucosamine 3-sulfotransferase 1 [Source:VGNC Symbol;Acc:VGNC:29958]

Location

Primary_assembly 6: 106,503,518-106,540,517 reverse strand.

ARS-UCD2.0:CM008173.2

About this gene

This gene has 5 transcripts (splice variants), 187 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000133241.1	HS3ST1-202	2810	312aa	ENSBTAP00000080376.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0VCB5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000095588.1	HS3ST1-203	2498	312aa	ENSBTAP00000086481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0VCB5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000097648.1	HS3ST1-201	2384	312aa	ENSBTAP00000086782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0VCB5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000009799.5	HS3ST1-204	1460	312aa	ENSBTAP00000009799.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0VCB5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000131727.1	HS3ST1-205	1250	312aa	ENSBTAP00000088208.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0VCB5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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