Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS41 ENSBTAG00000007305

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Description

VPS41 subunit of HOPS complex [Source:VGNC Symbol;Acc:VGNC:36823]

Location

Primary_assembly 4: 81,966,837-82,193,208 forward strand.

ARS-UCD2.0:CM008171.2

About this gene

This gene has 6 transcripts (splice variants) and 209 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000067147.3	VPS41-203	2760	912aa	ENSBTAP00000060406.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LTK2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000108439.2	VPS41-204	4805	854aa	ENSBTAP00000080534.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SAQ4 A3KN15	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000009615.8	VPS41-205	4730	829aa	ENSBTAP00000009615.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PYD7	-
ENSBTAT00000129564.2	VPS41-206	4676	811aa	ENSBTAP00000095769.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9THU0	-
ENSBTAT00000098462.1	VPS41-201	2900	799aa	ENSBTAP00000102614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TZD5	-
ENSBTAT00000091868.1	VPS41-202	2626	866aa	ENSBTAP00000074975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RRU8	-

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Summary

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