Summary
- Splice variants
- Transcript comparison
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Gene: RAI14 ENSBTAG00000007071

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Description

retinoic acid induced 14 [Source:VGNC Symbol;Acc:VGNC:33696]

Location

Primary_assembly 20: 39,313,837-39,475,310 reverse strand.

ARS-UCD2.0:CM008187.2

About this gene

This gene has 5 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000009296.7	RAI14-201	4121	1025aa	ENSBTAP00000009296.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N0H4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000093020.1	RAI14-202	4239	1012aa	ENSBTAP00000077620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RYD3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000089390.1	RAI14-203	4146	981aa	ENSBTAP00000086528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9STV0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000070752.2	RAI14-204	4059	952aa	ENSBTAP00000074309.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MIZ7	-
ENSBTAT00000079614.3	RAI14-205	3779	982aa	ENSBTAP00000058947.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MVC6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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