Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RASGEF1A ENSBTAG00000006870

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Description

RasGEF domain family member 1A [Source:VGNC Symbol;Acc:VGNC:33743]

Location

Primary_assembly 28: 13,591,901-13,630,366 reverse strand.

ARS-UCD2.0:CM008195.2

About this gene

This gene has 4 transcripts (splice variants), 125 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000009038.7	RASGEF1A-204	2326	508aa	ENSBTAP00000009038.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3S5ZPI5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000119213.1	RASGEF1A-202	2595	473aa	ENSBTAP00000093371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T9Q9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000084300.2	RASGEF1A-203	2543	481aa	ENSBTAP00000061902.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N010	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000076538.2	RASGEF1A-201	2430	489aa	ENSBTAP00000065647.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M5Q5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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