Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RAPGEF3 ENSBTAG00000006828

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Description

Rap guanine nucleotide exchange factor 3 [Source:VGNC Symbol;Acc:VGNC:33724]

Location

Primary_assembly 5: 32,528,563-32,552,640 forward strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000090674.2	RAPGEF3-204	5799	983aa	ENSBTAP00000087568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9STU5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000092389.2	RAPGEF3-201	5925	944aa	ENSBTAP00000082352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SET4	-
ENSBTAT00000008976.6	RAPGEF3-202	5862	923aa	ENSBTAP00000008976.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1ME49	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000104485.2	RAPGEF3-203	5661	856aa	ENSBTAP00000079173.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S789	-

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Summary

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