Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CCDC102B ENSBTAG00000006726

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Description

coiled-coil domain containing 102B [Source:VGNC Symbol;Acc:VGNC:56364]

Location

Primary_assembly 24: 8,051,467-8,402,268 reverse strand.

ARS-UCD2.0:CM008191.2

About this gene

This gene has 5 transcripts (splice variants), 122 orthologues and 42 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000090068.1	CCDC102B-202	3129	592aa	ENSBTAP00000101719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TSY4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000100492.1	CCDC102B-201	2532	485aa	ENSBTAP00000076050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RT71	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000008842.7	CCDC102B-204	1848	510aa	ENSBTAP00000008842.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BLP9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000097261.1	CCDC102B-205	1807	473aa	ENSBTAP00000098974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TKK8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000079784.2	CCDC102B-203	1461	471aa	ENSBTAP00000060617.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LU25	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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