Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PTGS1 ENSBTAG00000006716

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Description

prostaglandin-endoperoxide synthase 1 [Source:VGNC Symbol;Acc:VGNC:33511]

Location

Primary_assembly 11: 93,225,093-93,262,105 forward strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 6 transcripts (splice variants), 255 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000008833.7	PTGS1-204	2877	635aa	ENSBTAP00000008833.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DI94	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000072162.3	PTGS1-203	3698	610aa	ENSBTAP00000067118.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N853	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000120183.1	PTGS1-201	3060	605aa	ENSBTAP00000079185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S5R7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000123200.1	PTGS1-202	2814	614aa	ENSBTAP00000076063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RY62	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000084644.3	PTGS1-206	2582	602aa	ENSBTAP00000065493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M5D3	-
ENSBTAT00000066886.2	PTGS1-205	2570	587aa	ENSBTAP00000067575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MBB7	-

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Summary

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