Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPN1 ENSBTAG00000006616

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Description

protein tyrosine phosphatase non-receptor type 1 [Source:VGNC Symbol;Acc:VGNC:33529]

Location

Primary_assembly 13: 78,534,136-78,597,691 forward strand.

ARS-UCD2.0:CM008180.2

About this gene

This gene has 3 transcripts (splice variants), 208 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000125559.2	PTPN1-201	1472	429aa	ENSBTAP00000097440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TFV5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000122356.2	PTPN1-203	4715	404aa	ENSBTAP00000099296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TQK7	-
ENSBTAT00000008678.8	PTPN1-202	4643	425aa	ENSBTAP00000008678.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QQN2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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