Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SGSM1 ENSBTAG00000006592

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Description

small G protein signaling modulator 1 [Source:VGNC Symbol;Acc:VGNC:34550]

Location

Primary_assembly 17: 65,010,768-65,084,795 forward strand.

ARS-UCD2.0:CM008184.2

About this gene

This gene has 5 transcripts (splice variants), 272 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000073161.2	SGSM1-205	4771	1164aa	ENSBTAP00000060819.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LYT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000066416.3	SGSM1-201	5571	1149aa	ENSBTAP00000059216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MVQ9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000083118.3	SGSM1-202	5406	1094aa	ENSBTAP00000067855.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N9L9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000068842.3	SGSM1-203	5388	1088aa	ENSBTAP00000070876.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NGE4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000008658.6	SGSM1-204	4598	1139aa	ENSBTAP00000008658.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MEY0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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