Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HDGF ENSBTAG00000039793

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Description

heparin binding growth factor [Source:VGNC Symbol;Acc:VGNC:29787]

Location

Primary_assembly 3: 14,081,977-14,097,339 forward strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 6 transcripts (splice variants), 191 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000122072.2	HDGF-201	2097	249aa	ENSBTAP00000096511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TEE9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000008609.7	HDGF-202	2374	246aa	ENSBTAP00000008609.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9XSK7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000069500.3	HDGF-204	2314	224aa	ENSBTAP00000067749.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08E18	-
ENSBTAT00000124735.2	HDGF-205	2280	224aa	ENSBTAP00000095170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TEF7	-
ENSBTAT00000130112.2	HDGF-206	2072	225aa	ENSBTAP00000076078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RY87	-
ENSBTAT00000075077.3	HDGF-203	1149	240aa	ENSBTAP00000063096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M0D3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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