Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: PTCD3 ENSBTAG00000006482

.

Description

pentatricopeptide repeat domain 3 [Source:VGNC Symbol;Acc:VGNC:33491]

Location

Primary_assembly 11: 48,727,831-48,758,984 reverse strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 4 transcripts (splice variants) and 201 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000126450.1	PTCD3-201	2732	727aa	ENSBTAP00000075785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RSV1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000008498.5	PTCD3-202	2615	688aa	ENSBTAP00000008498.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KI62	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000074341.2	PTCD3-203	2603	684aa	ENSBTAP00000064745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M8H3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000131178.1	PTCD3-204	2468	639aa	ENSBTAP00000086443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SJI2	-

.

Summary

.

.