Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GGA1 ENSBTAG00000006464

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Description

golgi associated, gamma adaptin ear containing, ARF binding protein 1 [Source:VGNC Symbol;Acc:VGNC:29335]

Location

Primary_assembly 5: 109,458,955-109,478,297 forward strand.

ARS-UCD2.0:CM008172.2

About this gene

This gene has 5 transcripts (splice variants), 273 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000008477.8	GGA1-201	3194	668aa	ENSBTAP00000008477.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RN30	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000096418.1	GGA1-205	2997	642aa	ENSBTAP00000077630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RW43	-
ENSBTAT00000008480.8	GGA1-202	2939	583aa	ENSBTAP00000008480.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MEP7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000097275.2	GGA1-204	2878	590aa	ENSBTAP00000101030.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TRM4	-
ENSBTAT00000117455.2	GGA1-203	2831	547aa	ENSBTAP00000094355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TDW5	-

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Summary

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