Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SPTBN2 ENSBTAG00000005929

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Description

spectrin beta, non-erythrocytic 2 [Source:UniProtKB Gene Name;Acc:A0AAA9SLH5]

Location

Primary_assembly 29: 44,712,351-44,754,009 reverse strand.

ARS-UCD2.0:CM008196.2

About this gene

This gene has 7 transcripts (splice variants), 201 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000129631.1	SPTBN2-205	8061	2413aa	ENSBTAP00000098178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TLS4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000123030.1	SPTBN2-204	8442	2394aa	ENSBTAP00000087223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SLH5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000132429.1	SPTBN2-202	8379	2392aa	ENSBTAP00000095224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TB55	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000091251.1	SPTBN2-201	8217	2338aa	ENSBTAP00000090019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T0Y4	-
ENSBTAT00000111828.1	SPTBN2-203	8166	2321aa	ENSBTAP00000089307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SYH8	-
ENSBTAT00000086896.2	SPTBN2-206	7399	2380aa	ENSBTAP00000061713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LWU2	-
ENSBTAT00000007787.7	SPTBN2-207	6667	2185aa	ENSBTAP00000007787.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BMN5	-

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Summary

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