Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC6A1 ENSBTAG00000005857

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Description

solute carrier family 6 member 1 [Source:VGNC Symbol;Acc:VGNC:34913]

Location

Primary_assembly 22: 55,035,915-55,075,936 forward strand.

ARS-UCD2.0:CM008189.2

About this gene

This gene has 4 transcripts (splice variants), 280 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000007699.7	SLC6A1-203	4409	606aa	ENSBTAP00000007699.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6DMF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000072556.2	SLC6A1-204	3661	458aa	ENSBTAP00000070728.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NG35	-
ENSBTAT00000095096.2	SLC6A1-202	1931	541aa	ENSBTAP00000102546.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TVA0	-
ENSBTAT00000118441.2	SLC6A1-201	859	184aa	ENSBTAP00000099299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TLJ1	-

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Summary

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