Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SKIC2 ENSBTAG00000005587

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Description

SKI2 subunit of superkiller complex [Source:VGNC Symbol;Acc:VGNC:107293]

Gene Synonyms

SKIV2L

Location

Primary_assembly 23: 27,398,980-27,409,441 reverse strand.

ARS-UCD2.0:CM008190.2

About this gene

This gene has 5 transcripts (splice variants), 185 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000145238.1	SKIC2-204	3849	1246aa	ENSBTAP00000106068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000120731.1	SKIC2-201	4147	1211aa	ENSBTAP00000081843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SE27	-
ENSBTAT00000134622.2	SKIC2-202	4019	1199aa	ENSBTAP00000084480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SNN8	-
ENSBTAT00000007339.7	SKIC2-205	3642	1184aa	ENSBTAP00000007339.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BMS0	-
ENSBTAT00000091907.2	SKIC2-203	3624	1201aa	ENSBTAP00000092898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T275	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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