Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LHX6 ENSBTAG00000005525

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Description

LIM homeobox 6 [Source:VGNC Symbol;Acc:VGNC:30876]

Location

Primary_assembly 11: 93,085,035-93,109,897 reverse strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 4 transcripts (splice variants), 271 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000007266.5	LHX6-204	2393	392aa	ENSBTAP00000007266.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1B8I6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000080734.2	LHX6-202	2316	377aa	ENSBTAP00000064845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N4R1	-
ENSBTAT00000105025.1	LHX6-203	2289	368aa	ENSBTAP00000097822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TLK5	-
ENSBTAT00000109372.1	LHX6-201	2102	366aa	ENSBTAP00000080212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S9W4	-

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Summary

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