Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
Regulation
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ID History
- Gene history

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Gene: GTF2H1 ENSBTAG00000005160

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Description

ral transcription factor IIH subunit 1 [Source:VGNC Symbol;Acc:VGNC:29695]

Location

Primary_assembly 29: 26,326,212-26,355,709 reverse strand.

ARS-UCD2.0:CM008196.2

About this gene

This gene has 3 transcripts (splice variants) and 227 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000006803.7	GTF2H1-202	2760	523aa	ENSBTAP00000006803.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6DLT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000112022.1	GTF2H1-201	2485	516aa	ENSBTAP00000101795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TX60	-
ENSBTAT00000104459.1	GTF2H1-203	2003	517aa	ENSBTAP00000087586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SMK2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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