Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: BCL9L ENSBTAG00000005138

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Description

BCL9 like [Source:VGNC Symbol;Acc:VGNC:58093]

Location

Primary_assembly 15: 29,495,311-29,537,895 reverse strand.

ARS-UCD2.0:CM008182.2

About this gene

This gene has 4 transcripts (splice variants), 192 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000134936.1	BCL9L-202	5008	1543aa	ENSBTAP00000090337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T3R5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000067448.2	BCL9L-203	4833	1495aa	ENSBTAP00000066082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M6V2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000085515.2	BCL9L-201	4733	1354aa	ENSBTAP00000074183.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NN85	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000006774.5	BCL9L-204	4679	1515aa	ENSBTAP00000006774.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1B8K0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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