Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LPGAT1 ENSBTAG00000005137

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Description

lysophosphatidylglycerol acyltransferase 1 [Source:VGNC Symbol;Acc:VGNC:30965]

Location

Primary_assembly 16: 71,591,831-71,720,055 forward strand.

ARS-UCD2.0:CM008183.2

About this gene

This gene has 6 transcripts (splice variants), 204 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000071102.3	LPGAT1-204	6319	507aa	ENSBTAP00000059374.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LJ78	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000072432.3	LPGAT1-206	6108	419aa	ENSBTAP00000065780.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MAX5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000076220.3	LPGAT1-205	5848	391aa	ENSBTAP00000060004.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MWR5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000093089.1	LPGAT1-202	2349	357aa	ENSBTAP00000087348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9ST88	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000110389.1	LPGAT1-203	1574	374aa	ENSBTAP00000087482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9STM0	-
ENSBTAT00000006773.6	LPGAT1-201	1368	338aa	ENSBTAP00000006773.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6DMF0	-

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Summary

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