Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CTNNAL1 ENSBTAG00000004997

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Description

catenin alpha like 1 [Source:VGNC Symbol;Acc:VGNC:27801]

Location

Primary_assembly 8: 98,544,843-98,601,628 reverse strand.

ARS-UCD2.0:CM008175.2

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000116503.1	CTNNAL1-201	3286	729aa	ENSBTAP00000078773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S1B7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000006577.7	CTNNAL1-203	3124	697aa	ENSBTAP00000006577.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BBP2	-
ENSBTAT00000134974.1	CTNNAL1-202	3082	683aa	ENSBTAP00000097888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9THZ9	-
ENSBTAT00000103657.1	CTNNAL1-204	659	188aa	ENSBTAP00000088714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SXB5	-

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Summary

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