Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ABLIM1 ENSBTAG00000004899

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Description

actin binding LIM protein 1 [Source:VGNC Symbol;Acc:VGNC:55931]

Location

Primary_assembly 26: 34,905,093-35,139,192 reverse strand.

ARS-UCD2.0:CM008193.2

About this gene

This gene has 7 transcripts (splice variants), 275 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000066909.2	ABLIM1-205	3147	835aa	ENSBTAP00000073744.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MQ81	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000077471.2	ABLIM1-206	2982	780aa	ENSBTAP00000059044.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LUW9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000006447.7	ABLIM1-207	2886	748aa	ENSBTAP00000006447.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MI97	-
ENSBTAT00000066506.2	ABLIM1-203	2812	657aa	ENSBTAP00000057249.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LG07	-
ENSBTAT00000076022.3	ABLIM1-204	2707	622aa	ENSBTAP00000066309.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LZL1	-
ENSBTAT00000121424.1	ABLIM1-201	2272	457aa	ENSBTAP00000080454.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SDM2	-
ENSBTAT00000099479.1	ABLIM1-202	2110	403aa	ENSBTAP00000091824.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T5I1	-

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Summary

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