Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TUB ENSBTAG00000004862

.

Description

TUB bipartite transcription factor [Source:VGNC Symbol;Acc:VGNC:36503]

Location

Primary_assembly 15: 44,436,017-44,522,390 reverse strand.

ARS-UCD2.0:CM008182.2

About this gene

This gene has 5 transcripts (splice variants), 206 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000006391.5	TUB-205	2177	593aa	ENSBTAP00000006391.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1B8A6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000068156.2	TUB-203	2823	540aa	ENSBTAP00000065898.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MB55	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000123915.1	TUB-204	2750	497aa	ENSBTAP00000088469.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SYN0	-
ENSBTAT00000083367.2	TUB-201	2727	508aa	ENSBTAP00000072075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MQM7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000128683.1	TUB-202	2721	494aa	ENSBTAP00000094692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TD62	-

.

Summary

.

.