Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: MSI2 ENSBTAG00000004406

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Description

musashi RNA binding protein 2 [Source:VGNC Symbol;Acc:VGNC:107272]

Location

Primary_assembly 19: 8,092,178-8,494,968 forward strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 6 transcripts (splice variants), 260 orthologues and 47 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000067884.3	MSI2-204	3369	346aa	ENSBTAP00000059519.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LVY4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000111781.2	MSI2-201	3482	341aa	ENSBTAP00000093716.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TC85	-
ENSBTAT00000084828.3	MSI2-202	3341	307aa	ENSBTAP00000069932.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MFL4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000112921.2	MSI2-206	3083	255aa	ENSBTAP00000082914.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SC03	-
ENSBTAT00000005780.7	MSI2-203	2055	346aa	ENSBTAP00000005780.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MSL5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000076574.2	MSI2-205	760	250aa	ENSBTAP00000063649.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M5U3	-

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Summary

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