Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: UBAP2L ENSBTAG00000004271

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Description

ubiquitin associated protein 2 like [Source:VGNC Symbol;Acc:VGNC:36573]

Location

Primary_assembly 3: 16,252,914-16,296,273 reverse strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 5 transcripts (splice variants), 210 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000094379.1	UBAP2L-204	4560	1172aa	ENSBTAP00000095093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TFY7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000135157.1	UBAP2L-202	4365	1107aa	ENSBTAP00000079288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SAU9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000097466.1	UBAP2L-203	4356	1104aa	ENSBTAP00000083248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SAX1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000093384.1	UBAP2L-201	4281	1079aa	ENSBTAP00000083294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SHA6	-
ENSBTAT00000005611.7	UBAP2L-205	3377	994aa	ENSBTAP00000005611.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PRN0	-

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Summary

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