Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TRAPPC5 ENSBTAG00000004268

.

Description

trafficking protein particle complex subunit 5 [Source:VGNC Symbol;Acc:VGNC:36291]

Location

Primary_assembly 7: 16,525,934-16,528,841 forward strand.

ARS-UCD2.0:CM008174.2

About this gene

This gene has 4 transcripts (splice variants) and 207 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000005590.5	TRAPPC5-204	909	252aa	ENSBTAP00000005590.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MSD6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000105268.1	TRAPPC5-202	1409	188aa	ENSBTAP00000090570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T2C1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000105499.1	TRAPPC5-201	1409	188aa	ENSBTAP00000093790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T2C1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000126002.1	TRAPPC5-203	978	206aa	ENSBTAP00000102675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TVN3	-

.

Summary

.

.