Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TAF4B ENSBTAG00000004257

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Description

TATA-box binding protein associated factor 4b [Source:VGNC Symbol;Acc:VGNC:35575]

Location

Primary_assembly 24: 30,436,961-30,607,271 reverse strand.

ARS-UCD2.0:CM008191.2

About this gene

This gene has 6 transcripts (splice variants), 183 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000005578.6	TAF4B-203	2775	869aa	ENSBTAP00000005578.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BGK7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000125350.1	TAF4B-201	3552	845aa	ENSBTAP00000092453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T978	-
ENSBTAT00000105993.1	TAF4B-204	2598	810aa	ENSBTAP00000092372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T903	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000106896.1	TAF4B-205	2554	847aa	ENSBTAP00000077163.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S0K2	-
ENSBTAT00000094552.1	TAF4B-202	2487	824aa	ENSBTAP00000075797.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RUH1	-
ENSBTAT00000108933.1	TAF4B-206	2444	779aa	ENSBTAP00000090268.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SY29	-

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Summary

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