Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Gene: LCOR ENSBTAG00000075482

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Description

ligand dependent nuclear receptor corepressor [Source:UniProtKB Gene Name;Acc:E1BEA1]

Location

Primary_assembly 26: 18,134,593-18,233,822 forward strand.

ARS-UCD2.0:CM008193.2

About this gene

This gene has 2 transcripts (splice variants) and 241 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000143999.1	LCOR-201	4852	558aa	ENSBTAP00000105128.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000005261.7	LCOR-202	2272	406aa	ENSBTAP00000005261.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BEA1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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