Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GPN1 ENSBTAG00000003904

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Description

GPN-loop GTPase 1 [Source:VGNC Symbol;Acc:VGNC:29538]

Location

Primary_assembly 11: 72,043,664-72,068,849 reverse strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 4 transcripts (splice variants), 202 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000118437.1	GPN1-203	2880	385aa	ENSBTAP00000096136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TDE1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000005098.6	GPN1-201	2590	351aa	ENSBTAP00000005098.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YLF9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000106406.1	GPN1-204	2559	278aa	ENSBTAP00000091735.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T5B3	-
ENSBTAT00000075802.2	GPN1-202	2557	340aa	ENSBTAP00000070797.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MHU4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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