Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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ID History
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Gene: MSANTD1 ENSBTAG00000003776

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Description

Myb/SANT DNA binding domain containing 1 [Source:VGNC Symbol;Acc:VGNC:31688]

Location

Primary_assembly 6: 115,584,900-115,595,970 reverse strand.

ARS-UCD2.0:CM008173.2

About this gene

This gene has 2 transcripts (splice variants) and 198 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000122460.1	MSANTD1-202	1844	325aa	ENSBTAP00000088433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SSW0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000004915.6	MSANTD1-201	1682	265aa	ENSBTAP00000004915.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MX84	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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