Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FOXK2 ENSBTAG00000003687

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Description

forkhead box K2 [Source:VGNC Symbol;Acc:VGNC:55831]

Location

Primary_assembly 19: 50,029,248-50,079,703 reverse strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 5 transcripts (splice variants), 268 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000091346.1	FOXK2-202	3267	688aa	ENSBTAP00000097193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TJ50	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000127929.1	FOXK2-201	3117	658aa	ENSBTAP00000077112.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S4P7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000106341.1	FOXK2-204	2687	642aa	ENSBTAP00000094617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T9E3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000076910.2	FOXK2-205	2597	612aa	ENSBTAP00000066543.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M036	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000004805.7	FOXK2-203	2261	602aa	ENSBTAP00000004805.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MW83	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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