Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TCEA1 ENSBTAG00000003460

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Description

transcription elongation factor A1 [Source:VGNC Symbol;Acc:VGNC:35679]

Location

Primary_assembly 14: 21,961,033-21,989,950 reverse strand.

ARS-UCD2.0:CM008181.2

About this gene

This gene has 6 transcripts (splice variants), 215 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000004499.6	TCEA1-205	1088	316aa	ENSBTAP00000004499.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MIT2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000083795.2	TCEA1-203	2579	311aa	ENSBTAP00000068726.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF7AGL1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000112135.1	TCEA1-202	2551	281aa	ENSBTAP00000085847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SHZ1	-
ENSBTAT00000129448.1	TCEA1-201	2349	280aa	ENSBTAP00000103427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9U124	-
ENSBTAT00000096062.1	TCEA1-204	1997	117aa	ENSBTAP00000093066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T5G7	-
ENSBTAT00000116856.1	TCEA1-206	398	87aa	ENSBTAP00000080904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S4P3	-

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Summary

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