Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HORMAD1 ENSBTAG00000002724

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Description

HORMA domain containing 1 [Source:VGNC Symbol;Acc:VGNC:55235]

Location

Primary_assembly 3: 20,016,337-20,036,217 forward strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 6 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000003529.6	HORMAD1-202	1878	393aa	ENSBTAP00000003529.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KIY6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000003530.7	HORMAD1-203	1857	385aa	ENSBTAP00000003530.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YJV4	-
ENSBTAT00000100599.2	HORMAD1-204	1785	362aa	ENSBTAP00000084193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SFP7	-
ENSBTAT00000122913.1	HORMAD1-206	1680	356aa	ENSBTAP00000086572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SMP1	-
ENSBTAT00000093207.1	HORMAD1-205	1525	313aa	ENSBTAP00000084561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SL04	-
ENSBTAT00000071690.3	HORMAD1-201	1303	359aa	ENSBTAP00000061544.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LWE5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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