Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PRPF38A ENSBTAG00000002720

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Description

pre-mRNA processing factor 38A [Source:VGNC Symbol;Acc:VGNC:33375]

Location

Primary_assembly 3: 93,934,635-93,956,227 reverse strand.

ARS-UCD2.0:CM008170.2

About this gene

This gene has 2 transcripts (splice variants), 227 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000003524.5	PRPF38A-201	4549	312aa	ENSBTAP00000003524.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0P5I6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000087041.2	PRPF38A-202	910	296aa	ENSBTAP00000065860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N636	-

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Summary

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