Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS52 ENSBTAG00000002643

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Description

VPS52 subunit of GARP complex [Source:VGNC Symbol;Acc:VGNC:36828]

Location

Primary_assembly 23: 7,428,093-7,446,221 reverse strand.

ARS-UCD2.0:CM008190.2

About this gene

This gene has 2 transcripts (splice variants) and 199 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000003427.8	VPS52-202	3022	701aa	ENSBTAP00000003427.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BDC9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000076838.2	VPS52-201	2742	659aa	ENSBTAP00000069431.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MJR9	-

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Summary

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