Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCN9A ENSBTAG00000002425

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Description

sodium voltage-gated channel alpha subunit 9 [Source:VGNC Symbol;Acc:VGNC:34355]

Location

Primary_assembly 2: 29,996,676-30,088,154 forward strand.

ARS-UCD2.0:CM008169.2

About this gene

This gene has 2 transcripts (splice variants), 110 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000003146.7	SCN9A-201	6241	1987aa	ENSBTAP00000003146.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0QVY7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000076370.2	SCN9A-202	6208	1976aa	ENSBTAP00000070292.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MHX0	-

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Summary

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