Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NUCB1 ENSBTAG00000002378

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Description

nucleobindin 1 [Source:VGNC Symbol;Acc:VGNC:32318]

Location

Primary_assembly 18: 55,487,471-55,503,521 forward strand.

ARS-UCD2.0:CM008185.2

About this gene

This gene has 5 transcripts (splice variants), 190 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000136481.1	NUCB1-202	1667	461aa	ENSBTAP00000106192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000140056.1	NUCB1-204	2321	457aa	ENSBTAP00000106405.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000003073.8	NUCB1-201	2136	442aa	ENSBTAP00000003073.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DHZ5 Q0P569	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000153851.1	NUCB1-205	1254	417aa	ENSBTAP00000107479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000138989.1	NUCB1-203	1241	319aa	ENSBTAP00000106174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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