Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SPTLC1 ENSBTAG00000002220

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Description

serine palmitoyltransferase long chain base subunit 1 [Source:VGNC Symbol;Acc:VGNC:35256]

Location

Primary_assembly 8: 85,780,350-85,846,082 forward strand.

ARS-UCD2.0:CM008175.2

About this gene

This gene has 3 transcripts (splice variants), 210 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000116327.2	SPTLC1-201	1562	494aa	ENSBTAP00000098247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TPF7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000002872.7	SPTLC1-202	2692	473aa	ENSBTAP00000002872.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3MHG1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000132140.2	SPTLC1-203	2584	437aa	ENSBTAP00000082658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SG66	-

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Summary

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